Post by plurelebexit on May 21, 2019 9:58:11 GMT -5
Main category / Education
Sub category / Science
Developer / CompOmics
Filesize / 113459
Title / PeptideShaker
goolnk.com/xo6QdV
⭐ PeptideShaker_vers_1.16.40.zip
xtandem input_searchGui path missing on mac · Issue #29 · compomics/searchgui · GitHub · QC Plots: get an overview of the quality of your results with Quality Control plots. esimsa2D NEW FEATURE: Added an option for exporting the maximal protein set (the accession numbers) to a file. > What steps will reproduce the problem? I want to search a mgf file with xtandem. > What is the expected output? What do you see instead? The progress bar stops at 20% and searchgui freezes. > What version of the product are you using? On what operating system? searchgui 1.20.8. I use Mac OS X 10.9.4 > Please provide any additional information below. from searchgui log: xtandem command: /Users/bla/Documents/bin/SearchGUI/resources/XTandem/osx/tandem /Users/bla/Documents/bin/SearchGUI/resources/XTandem/osx/ And the xtandem input xml file: all /Users/bla/Documents/Projects/1409analyzeMS/ /Users/bla/Documents/Projects/1409analyzeMS/search_dbfinal/ Here it seems like as xtandem cant find and If I manually add the full path for the files, xtandem starts and finishes without error when started on the command line. > If the reported issue resulted in the tool crashing, please > also upload the file called (found in the > SearchGUI-X.Y.Z\resources folder). BUG FIX: Fixed a bug where the search engine version numbers had gone missing when loading from mzid files.
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Version on 10.11.4 macpkg.icu/?id=61024&kw=ver_1.16.35_PeptideShaker_h5xi.dmg [133881 kbytes]
BUG FIX: Fixed a bug where the spectrum annotations could not be changed from the annotation menu bar in the Spectrum IDs and PTM tabs. estimates protein identification false discovery rates Changes in PeptideShaker 1.9.1 (April 1. 2016): PAnalyzer generates 2D/3D images for elements in ICP-MS [18] Changes in PeptideShaker 0.40.4 (June 28. 2015): FEATURE IMPROVEMENT: Improved the error handling if a required mgf file is missing when trying open a new project. a selection of tools and libraries for interacting with data in PRIDE
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